mdpy.core.Topology#

class mdpy.core.Topology[source]#

__init__() → None[source]#

Methods

`__init__`()
`add_angle`(angle)
`add_bond`(bond)
`add_dihedral`(dihedral[, scaling_factor])
`add_improper`(improper)
`add_particles`(particles)
`del_angle`(angle)
`del_bond`(bond)
`del_dihedral`(dihedral)
`del_improper`(improper)
`del_particles`(particles)
`join`()
`split`()

Attributes

`angles`
`bonds`
`charges`
`device_charges`
`device_excluded_particles`
`device_exclusion_map`
`device_masses`
`device_scaled_particles`
`device_sorted_charges`
`dihedrals`
`excluded_particles`
`impropers`
`is_joined`
`masses`
`num_angles`
`num_bonds`
`num_dihedrals`
`num_impropers`
`num_particles`
`particles`
`scaled_particles`